Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm12943-201ENSMUST00000119616 210 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm7150-201ENSMUST00000122032 981 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm5340-201ENSMUST00000203733 880 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm30671-201ENSMUST00000214898 318 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm6390-201ENSMUST00000215034 589 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm26134-201ENSMUST00000178484 110 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm44315-201ENSMUST00000203041 219 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm17931-201ENSMUST00000208132 634 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm2553-201ENSMUST00000215986 605 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gm18514-201ENSMUST00000218980 436 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.59□□□□□ -0.71
Shank1D3YZU1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shank1D3YZU1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm11979-201ENSMUST00000119629 743 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm24248-201ENSMUST00000157321 322 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm8723-201ENSMUST00000166076 820 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm8701-201ENSMUST00000169259 874 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm17070-201ENSMUST00000170463 784 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm44647-201ENSMUST00000207402 428 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm45856-201ENSMUST00000212752 416 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms