Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.66□□□□□ -0.7
H2afb3S4R1G7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm23931-201ENSMUST00000103842 109 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm37424-201ENSMUST00000191727 561 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm17931-201ENSMUST00000208132 634 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm10608-202ENSMUST00000213924 676 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gm10312-201ENSMUST00000078515 489 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
H2afb3S4R1G7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
H2afb3S4R1G7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.65□□□□□ -0.71
H2afb3S4R1G7 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.65□□□□□ -0.71
H2afb3S4R1G7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm11793-201ENSMUST00000120433 981 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm13786-201ENSMUST00000122371 333 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm29396-201ENSMUST00000185659 716 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm18062-201ENSMUST00000208020 547 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm18055-201ENSMUST00000208254 547 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm6013-201ENSMUST00000212264 699 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms