Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cldn9Q9Z0S7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm11960-201ENSMUST00000122068 925 ntBASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm26361-201ENSMUST00000158868 186 ntBASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cldn9Q9Z0S7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm25890-201ENSMUST00000177643 165 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm22614-201ENSMUST00000178300 165 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm27627-201ENSMUST00000183644 150 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm38314-201ENSMUST00000195709 625 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm17812-201ENSMUST00000204935 318 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm17827-201ENSMUST00000211825 742 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm22042-201ENSMUST00000082989 165 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gm26110-201ENSMUST00000083971 165 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Olfr582-201ENSMUST00000098212 960 ntBASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cldn9Q9Z0S7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cldn9Q9Z0S7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cldn9Q9Z0S7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms