Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm13570-201ENSMUST00000140763 309 ntBASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm2546-201ENSMUST00000182630 991 ntBASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm9823-201ENSMUST00000051212 327 ntBASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lima1Q9ERG0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm13392-201ENSMUST00000117708 150 ntBASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm17420-201ENSMUST00000164753 153 ntBASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm7046-201ENSMUST00000221351 977 ntBASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lima1Q9ERG0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lima1Q9ERG0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lima1Q9ERG0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lima1Q9ERG0 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.65□□□□□ -0.55
Lima1Q9ERG0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lima1Q9ERG0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lima1Q9ERG0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm27572-201ENSMUST00000183702 255 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm42937-201ENSMUST00000197360 752 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Morn2-202ENSMUST00000227729 656 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm10478-201ENSMUST00000084451 396 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lima1Q9ERG0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms