Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.51■□□□□ 0.07
U2af1Q9D883 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.51■□□□□ 0.07
U2af1Q9D883 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
U2af1Q9D883 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.51■□□□□ 0.07
U2af1Q9D883 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.5■□□□□ 0.07
U2af1Q9D883 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
U2af1Q9D883 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Mir6546-201ENSMUST00000184460 62 ntBASIC15.5■□□□□ 0.07
U2af1Q9D883 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.5■□□□□ 0.07
U2af1Q9D883 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Gm38151-201ENSMUST00000195085 289 ntBASIC15.5■□□□□ 0.07
U2af1Q9D883 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.5■□□□□ 0.07
U2af1Q9D883 Gm1995-201ENSMUST00000220838 2602 ntBASIC15.5■□□□□ 0.07
U2af1Q9D883 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
U2af1Q9D883 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
U2af1Q9D883 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 Paupar-201ENSMUST00000194826 3482 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm11960-201ENSMUST00000122068 925 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm29499-201ENSMUST00000189151 486 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm28329-201ENSMUST00000191208 689 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm29171-201ENSMUST00000191397 486 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
U2af1Q9D883 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.49■□□□□ 0.07
U2af1Q9D883 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
U2af1Q9D883 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
U2af1Q9D883 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
U2af1Q9D883 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms