Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm10434-201ENSMUST00000101158 471 ntBASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm19287-201ENSMUST00000203190 358 ntBASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm40466-201ENSMUST00000212174 422 ntBASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm18065-201ENSMUST00000221395 526 ntBASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Thoc7-209ENSMUST00000225325 765 ntBASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ssu72Q9CY97 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Auts2-212ENSMUST00000178555 309 ntBASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Gm43930-201ENSMUST00000203868 845 ntBASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ssu72Q9CY97 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms