Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm21139-201ENSMUST00000186594 877 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm45224-201ENSMUST00000208203 414 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim33Q99PP7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim33Q99PP7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trim33Q99PP7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Gm13296-201ENSMUST00000117854 997 ntBASIC11.83□□□□□ -0.52
Trim33Q99PP7 Gm13438-201ENSMUST00000120100 573 ntBASIC11.83□□□□□ -0.52
Trim33Q99PP7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.83□□□□□ -0.52
Trim33Q99PP7 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.83□□□□□ -0.52
Trim33Q99PP7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim33Q99PP7 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.83□□□□□ -0.52
Trim33Q99PP7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm14247-201ENSMUST00000120950 237 ntBASIC11.82□□□□□ -0.52
Trim33Q99PP7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.82□□□□□ -0.52
Trim33Q99PP7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.82□□□□□ -0.52
Trim33Q99PP7 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm9257-201ENSMUST00000221254 232 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 197.4 ms