Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm37826-201ENSMUST00000195329 322 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm7504-201ENSMUST00000201449 424 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd2Q99JR8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm12247-201ENSMUST00000117585 670 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm13600-201ENSMUST00000117949 744 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.91□□□□□ -0.5
Smarcd2Q99JR8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smarcd2Q99JR8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms