Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gm44405-201ENSMUST00000198952 126 ntBASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gm5904-201ENSMUST00000210286 865 ntBASIC11.91□□□□□ -0.5
Cdk9Q99J95 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.91□□□□□ -0.5
Cdk9Q99J95 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.91□□□□□ -0.5
Cdk9Q99J95 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.91□□□□□ -0.5
Cdk9Q99J95 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm12742-201ENSMUST00000117326 410 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm45925-201ENSMUST00000218882 744 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm22058-201ENSMUST00000083393 310 ntBASIC11.9□□□□□ -0.5
Cdk9Q99J95 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk9Q99J95 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cdk9Q99J95 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdk9Q99J95 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms