Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.4□□□□□ -0.43
Pcdha3Q91Y16 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdha3Q91Y16 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm7857-201ENSMUST00000117957 358 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm5419-201ENSMUST00000119301 527 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm12266-201ENSMUST00000120311 962 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm37666-201ENSMUST00000194110 866 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm43184-201ENSMUST00000197247 542 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm8956-201ENSMUST00000203939 825 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.39□□□□□ -0.43
Pcdha3Q91Y16 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm23949-201ENSMUST00000104027 127 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm37466-201ENSMUST00000195692 652 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm18893-201ENSMUST00000198416 943 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Rps4l-202ENSMUST00000204242 789 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdha3Q91Y16 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdha3Q91Y16 Gm17040-202ENSMUST00000170597 889 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms