Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp3Q91W36 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gm6027-201ENSMUST00000121467 756 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Usp3Q91W36 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gm27530-201ENSMUST00000184096 98 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gm44237-201ENSMUST00000205183 936 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Usp3Q91W36 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp3Q91W36 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.33□□□□□ -0.44
Usp3Q91W36 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp3Q91W36 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm8566-201ENSMUST00000120174 465 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.32□□□□□ -0.44
Usp3Q91W36 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm28064-201ENSMUST00000185639 858 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm4482-201ENSMUST00000200876 742 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm5369-201ENSMUST00000217499 588 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Olfr1153-201ENSMUST00000052300 957 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.32□□□□□ -0.44
Usp3Q91W36 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Usp3Q91W36 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp3Q91W36 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms