Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.96□□□□□ -0.17
Cchcr1Q8K2I2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Cchcr1Q8K2I2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Cchcr1Q8K2I2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cchcr1Q8K2I2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cchcr1Q8K2I2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cchcr1Q8K2I2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cchcr1Q8K2I2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm14127-201ENSMUST00000117906 678 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm27516-201ENSMUST00000184237 98 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm38266-201ENSMUST00000194931 421 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm44651-201ENSMUST00000207343 372 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm2553-201ENSMUST00000215986 605 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cchcr1Q8K2I2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gm45865-201ENSMUST00000211815 945 ntBASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Cts7-204ENSMUST00000225321 1257 ntBASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cchcr1Q8K2I2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 297.2 ms