Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfwd3Q8CIK8 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Rfwd3Q8CIK8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfwd3Q8CIK8 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rfwd3Q8CIK8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rfwd3Q8CIK8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rfwd3Q8CIK8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rfwd3Q8CIK8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm24749-201ENSMUST00000157838 343 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm8956-201ENSMUST00000203939 825 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfwd3Q8CIK8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm2260-201ENSMUST00000184965 657 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm7003-201ENSMUST00000195089 312 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm17931-201ENSMUST00000208132 634 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm8385-201ENSMUST00000058999 643 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Mir433-201ENSMUST00000093564 124 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms