Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.49□□□□□ -0.57
SynpoQ8CC35 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.49□□□□□ -0.57
SynpoQ8CC35 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SynpoQ8CC35 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm12266-201ENSMUST00000120311 962 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm25732-201ENSMUST00000175168 60 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm18304-201ENSMUST00000189162 546 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm37986-201ENSMUST00000193285 383 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm42997-202ENSMUST00000200321 985 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm9996-201ENSMUST00000070359 913 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.48□□□□□ -0.57
SynpoQ8CC35 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SynpoQ8CC35 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Gm23200-201ENSMUST00000104379 132 ntBASIC11.47□□□□□ -0.57
SynpoQ8CC35 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.47□□□□□ -0.57
SynpoQ8CC35 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms