Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf38bQ80SY5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm12196-201ENSMUST00000120954 262 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm28882-201ENSMUST00000185504 314 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm2517-201ENSMUST00000215651 348 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Mir483-201ENSMUST00000093631 73 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Prpf38bQ80SY5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm14585-201ENSMUST00000120713 634 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm14999-201ENSMUST00000121039 624 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm25881-201ENSMUST00000157783 103 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.48□□□□□ -0.41
Prpf38bQ80SY5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms