Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm25007-201ENSMUST00000083808 133 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm4726-201ENSMUST00000135604 736 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm6019-201ENSMUST00000148369 736 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm43058-201ENSMUST00000197645 625 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm19287-201ENSMUST00000203190 358 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.04□□□□□ -0.64
Pif1Q80SX8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC11.04□□□□□ -0.64
Pif1Q80SX8 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pif1Q80SX8 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.03□□□□□ -0.64
Pif1Q80SX8 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm17831-201ENSMUST00000205579 900 ntBASIC11.03□□□□□ -0.64
Pif1Q80SX8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm7600-201ENSMUST00000209657 785 ntBASIC11.03□□□□□ -0.64
Pif1Q80SX8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.03□□□□□ -0.64
Pif1Q80SX8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pif1Q80SX8 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 814.3 ms