Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm13809-201ENSMUST00000117921 597 ntBASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm15610-201ENSMUST00000120584 195 ntBASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm8199-201ENSMUST00000121323 823 ntBASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm37835-201ENSMUST00000193305 361 ntBASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm27530-201ENSMUST00000184096 98 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm10774-201ENSMUST00000188689 204 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm18893-201ENSMUST00000198416 943 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh8Q7TSK3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.67□□□□□ -0.54
Pcdh8Q7TSK3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms