Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Ctr9Q62018 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm13408-201ENSMUST00000119822 798 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm15432-201ENSMUST00000121106 195 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm12176-201ENSMUST00000121420 875 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm13935-201ENSMUST00000121859 798 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm10051-201ENSMUST00000145209 414 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm8815-201ENSMUST00000173809 620 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm5714-201ENSMUST00000197343 566 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ctr9Q62018 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.96□□□□□ -0.17
Ctr9Q62018 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctr9Q62018 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctr9Q62018 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctr9Q62018 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctr9Q62018 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctr9Q62018 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.96□□□□□ -0.18
Ctr9Q62018 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ctr9Q62018 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm12579-201ENSMUST00000118040 783 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm13263-201ENSMUST00000121271 838 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm10774-201ENSMUST00000188689 204 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.95□□□□□ -0.18
Ctr9Q62018 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.95□□□□□ -0.18
Ctr9Q62018 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ctr9Q62018 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.94□□□□□ -0.18
Ctr9Q62018 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm5523-201ENSMUST00000180415 997 ntBASIC13.94□□□□□ -0.18
Ctr9Q62018 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.94□□□□□ -0.18
Ctr9Q62018 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.94□□□□□ -0.18
Ctr9Q62018 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm6450-201ENSMUST00000200896 574 ntBASIC13.94□□□□□ -0.18
Ctr9Q62018 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ctr9Q62018 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms