Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Gm11960-201ENSMUST00000122068 925 ntBASIC12.3□□□□□ -0.44
Smarcd1Q61466 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.3□□□□□ -0.44
Smarcd1Q61466 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Gm43947-201ENSMUST00000203019 959 ntBASIC12.3□□□□□ -0.44
Smarcd1Q61466 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.3□□□□□ -0.44
Smarcd1Q61466 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.3□□□□□ -0.44
Smarcd1Q61466 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm11700-201ENSMUST00000119409 403 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm22902-201ENSMUST00000158488 302 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Mir8093-201ENSMUST00000185043 137 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm5982-201ENSMUST00000196234 512 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Matn2-203ENSMUST00000226766 3252 ntBASIC12.29□□□□□ -0.44
Smarcd1Q61466 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smarcd1Q61466 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smarcd1Q61466 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms