Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm13296-201ENSMUST00000117854 997 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm15276-201ENSMUST00000145953 498 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 AA914427-201ENSMUST00000193194 1166 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm45224-201ENSMUST00000208203 414 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav5d-4Q5R1F6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav5d-4Q5R1F6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Rgr-203ENSMUST00000225070 4704 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm25700-201ENSMUST00000177693 110 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm27320-201ENSMUST00000184892 109 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm38317-201ENSMUST00000195564 343 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm43962-201ENSMUST00000203898 190 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm8956-201ENSMUST00000203939 825 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm44967-201ENSMUST00000207047 631 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm13097-201ENSMUST00000210722 397 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms