Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm9550-201ENSMUST00000161130 862 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Spcs1-203ENSMUST00000226374 592 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.93□□□□□ -0.18
Limch1Q3UH68 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limch1Q3UH68 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm9062-201ENSMUST00000117712 727 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm14441-201ENSMUST00000121960 540 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm23699-201ENSMUST00000158835 135 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm27627-201ENSMUST00000183644 150 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 AY036118-201ENSMUST00000200021 923 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.92□□□□□ -0.18
Limch1Q3UH68 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Limch1Q3UH68 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Gm12380-201ENSMUST00000119012 544 ntBASIC13.91□□□□□ -0.18
Limch1Q3UH68 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Gm9211-201ENSMUST00000182882 975 ntBASIC13.91□□□□□ -0.18
Limch1Q3UH68 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.91□□□□□ -0.18
Limch1Q3UH68 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Gm37835-201ENSMUST00000193305 361 ntBASIC13.91□□□□□ -0.18
Limch1Q3UH68 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.91□□□□□ -0.18
Limch1Q3UH68 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.91□□□□□ -0.18
Limch1Q3UH68 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limch1Q3UH68 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms