Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.04□□□□□ -0.64
Emx1Q04742 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Emx1Q04742 Gm8420-201ENSMUST00000097103 598 ntBASIC11.04□□□□□ -0.64
Emx1Q04742 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.04□□□□□ -0.64
Emx1Q04742 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.04□□□□□ -0.64
Emx1Q04742 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Emx1Q04742 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Emx1Q04742 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Emx1Q04742 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Emx1Q04742 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.03□□□□□ -0.64
Emx1Q04742 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.03□□□□□ -0.64
Emx1Q04742 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Emx1Q04742 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Emx1Q04742 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.03□□□□□ -0.64
Emx1Q04742 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Emx1Q04742 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Emx1Q04742 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Emx1Q04742 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Emx1Q04742 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Emx1Q04742 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.02□□□□□ -0.65
Emx1Q04742 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.02□□□□□ -0.65
Emx1Q04742 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Emx1Q04742 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.02□□□□□ -0.65
Emx1Q04742 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Gm12997-201ENSMUST00000120207 640 ntBASIC11.02□□□□□ -0.65
Emx1Q04742 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.02□□□□□ -0.65
Emx1Q04742 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Emx1Q04742 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.02□□□□□ -0.65
Emx1Q04742 Gm8738-201ENSMUST00000172606 329 ntBASIC11.02□□□□□ -0.65
Emx1Q04742 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Emx1Q04742 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Emx1Q04742 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.02□□□□□ -0.65
Emx1Q04742 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.02□□□□□ -0.65
Emx1Q04742 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.02□□□□□ -0.65
Emx1Q04742 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Emx1Q04742 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms