Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm44647-201ENSMUST00000207402 428 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcc1P97496 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.79□□□□□ -0.04
Smarcc1P97496 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcc1P97496 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcc1P97496 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm9192-201ENSMUST00000183221 985 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm30671-201ENSMUST00000214898 318 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Gm10263-201ENSMUST00000085163 300 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.78□□□□□ -0.04
Smarcc1P97496 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcc1P97496 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcc1P97496 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcc1P97496 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcc1P97496 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcc1P97496 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcc1P97496 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcc1P97496 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.77□□□□□ -0.05
Smarcc1P97496 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.77□□□□□ -0.05
Smarcc1P97496 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.77□□□□□ -0.05
Smarcc1P97496 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Gm42779-201ENSMUST00000198807 406 ntBASIC14.77□□□□□ -0.05
Smarcc1P97496 Gm43380-201ENSMUST00000200421 220 ntBASIC14.77□□□□□ -0.05
Smarcc1P97496 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.05
Smarcc1P97496 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Smarcc1P97496 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smarcc1P97496 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.77□□□□□ -0.05
Smarcc1P97496 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcc1P97496 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarcc1P97496 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Smarcc1P97496 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms