Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43bP86448 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43bP86448 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43bP86448 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm24830-201ENSMUST00000102024 166 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm15808-201ENSMUST00000119046 604 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim43bP86448 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm25890-201ENSMUST00000177643 165 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Gm22614-201ENSMUST00000178300 165 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim43bP86448 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm22042-201ENSMUST00000082989 165 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Gm26232-201ENSMUST00000083360 166 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Gm26110-201ENSMUST00000083971 165 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim43bP86448 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43bP86448 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.18□□□□□ -0.46
Trim43bP86448 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43bP86448 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43bP86448 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.17□□□□□ -0.46
Trim43bP86448 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.17□□□□□ -0.46
Trim43bP86448 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm27046-201ENSMUST00000182160 463 ntBASIC12.17□□□□□ -0.46
Trim43bP86448 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.17□□□□□ -0.46
Trim43bP86448 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim43bP86448 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.17□□□□□ -0.46
Trim43bP86448 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim43bP86448 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim43bP86448 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim43bP86448 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.17□□□□□ -0.46
Trim43bP86448 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim43bP86448 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim43bP86448 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43bP86448 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms