Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.13□□□□□ -0.47
Msx3P70354 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Msx3P70354 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.13□□□□□ -0.47
Msx3P70354 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gm5616-201ENSMUST00000165252 384 ntBASIC12.13□□□□□ -0.47
Msx3P70354 Gm8741-201ENSMUST00000174736 384 ntBASIC12.13□□□□□ -0.47
Msx3P70354 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Msx3P70354 Gm8343-201ENSMUST00000182705 994 ntBASIC12.13□□□□□ -0.47
Msx3P70354 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.13□□□□□ -0.47
Msx3P70354 Gm17827-201ENSMUST00000211825 742 ntBASIC12.13□□□□□ -0.47
Msx3P70354 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.13□□□□□ -0.47
Msx3P70354 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.13□□□□□ -0.47
Msx3P70354 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.13□□□□□ -0.47
Msx3P70354 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.13□□□□□ -0.47
Msx3P70354 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Msx3P70354 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Gm22323-201ENSMUST00000103832 109 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Gm15198-201ENSMUST00000117283 177 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.12□□□□□ -0.47
Msx3P70354 Gm25700-201ENSMUST00000177693 110 ntBASIC12.12□□□□□ -0.47
Msx3P70354 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Gm27320-201ENSMUST00000184892 109 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.12□□□□□ -0.47
Msx3P70354 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Gm37259-201ENSMUST00000193903 849 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Gm43179-201ENSMUST00000198797 275 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Gm7783-201ENSMUST00000204795 781 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Gm4157-201ENSMUST00000211647 679 ntBASIC12.12□□□□□ -0.47
Msx3P70354 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Msx3P70354 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Msx3P70354 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx3P70354 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx3P70354 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx3P70354 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.11□□□□□ -0.47
Msx3P70354 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms