Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Gm9368-201ENSMUST00000219348 831 ntBASIC11.7□□□□□ -0.54
Traf6P70196 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.7□□□□□ -0.54
Traf6P70196 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Traf6P70196 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Traf6P70196 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.69□□□□□ -0.54
Traf6P70196 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Traf6P70196 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.69□□□□□ -0.54
Traf6P70196 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm7722-201ENSMUST00000120646 741 ntBASIC11.69□□□□□ -0.54
Traf6P70196 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.69□□□□□ -0.54
Traf6P70196 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Gm37489-201ENSMUST00000191883 159 ntBASIC11.69□□□□□ -0.54
Traf6P70196 Gm43822-201ENSMUST00000200285 476 ntBASIC11.69□□□□□ -0.54
Traf6P70196 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Gm10608-202ENSMUST00000213924 676 ntBASIC11.69□□□□□ -0.54
Traf6P70196 Gm8712-201ENSMUST00000221090 701 ntBASIC11.69□□□□□ -0.54
Traf6P70196 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.69□□□□□ -0.54
Traf6P70196 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.69□□□□□ -0.54
Traf6P70196 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Traf6P70196 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Traf6P70196 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Traf6P70196 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Traf6P70196 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.68□□□□□ -0.54
Traf6P70196 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.68□□□□□ -0.54
Traf6P70196 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Traf6P70196 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.68□□□□□ -0.54
Traf6P70196 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Traf6P70196 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms