Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm6P62313 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.4□□□□□ -0.74
Lsm6P62313 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.4□□□□□ -0.75
Lsm6P62313 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm6P62313 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm6P62313 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm6P62313 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.4□□□□□ -0.75
Lsm6P62313 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Lsm6P62313 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.4□□□□□ -0.75
Lsm6P62313 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.39□□□□□ -0.75
Lsm6P62313 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Lsm6P62313 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Lsm6P62313 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm25890-201ENSMUST00000177643 165 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Gm22614-201ENSMUST00000178300 165 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm22042-201ENSMUST00000082989 165 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Gm26110-201ENSMUST00000083971 165 ntBASIC10.39□□□□□ -0.75
Lsm6P62313 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm6P62313 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm6P62313 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lsm6P62313 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lsm6P62313 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm5616-201ENSMUST00000165252 384 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm8741-201ENSMUST00000174736 384 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm25700-201ENSMUST00000177693 110 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm8343-201ENSMUST00000182705 994 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 AY036118-201ENSMUST00000200021 923 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms