Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm27320-201ENSMUST00000184892 109 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 Gm44405-201ENSMUST00000198952 126 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm20482-202ENSMUST00000174729 825 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm26956-201ENSMUST00000182176 986 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.43□□□□□ -0.74
Sec61a1P61620 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm5950-201ENSMUST00000213337 772 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm6082-201ENSMUST00000215204 454 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sec61a1P61620 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.43□□□□□ -0.74
Sec61a1P61620 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a1P61620 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.43□□□□□ -0.74
Sec61a1P61620 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm24231-201ENSMUST00000104315 133 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm11222-201ENSMUST00000119005 738 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 Rmrp-201ENSMUST00000157463 271 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm45925-201ENSMUST00000218882 744 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms