Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm27514-201ENSMUST00000183692 110 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm18584-201ENSMUST00000203098 964 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm9899-201ENSMUST00000065519 555 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Snora73a-201ENSMUST00000082453 205 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm10478-201ENSMUST00000084451 396 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm5187-201ENSMUST00000117317 991 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm13570-201ENSMUST00000140763 309 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Mir1938-201ENSMUST00000158746 100 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm25927-201ENSMUST00000175058 117 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm37008-201ENSMUST00000195712 319 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.5□□□□□ -0.73
Sf3b6P59708 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b6P59708 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b6P59708 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b6P59708 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm14999-201ENSMUST00000121039 624 ntBASIC10.49□□□□□ -0.73
Sf3b6P59708 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms