Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nup43P59235 Gm27552-201ENSMUST00000183351 62 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Gm27844-201ENSMUST00000183613 62 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nup43P59235 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gm45251-201ENSMUST00000209486 1465 ntBASIC11.17□□□□□ -0.62
Nup43P59235 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.17□□□□□ -0.62
Nup43P59235 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup43P59235 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nup43P59235 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.16□□□□□ -0.62
Nup43P59235 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup43P59235 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Gm11663-201ENSMUST00000117888 290 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Gm7857-201ENSMUST00000117957 358 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Gm12217-201ENSMUST00000118858 696 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Gm16505-201ENSMUST00000179981 232 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup43P59235 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup43P59235 Rps4l-202ENSMUST00000204242 789 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup43P59235 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.16□□□□□ -0.62
Nup43P59235 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup43P59235 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.16□□□□□ -0.62
Nup43P59235 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup43P59235 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.15□□□□□ -0.62
Nup43P59235 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.15□□□□□ -0.62
Nup43P59235 Gm12501-201ENSMUST00000119163 529 ntBASIC11.15□□□□□ -0.62
Nup43P59235 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.15□□□□□ -0.62
Nup43P59235 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Nup43P59235 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.15□□□□□ -0.62
Nup43P59235 Gm4310-201ENSMUST00000177847 889 ntBASIC11.15□□□□□ -0.62
Nup43P59235 Mir6927-201ENSMUST00000184494 71 ntBASIC11.15□□□□□ -0.62
Nup43P59235 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup43P59235 Gm19208-201ENSMUST00000213861 912 ntBASIC11.15□□□□□ -0.62
Nup43P59235 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms