Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SmoP56726 Gm11960-201ENSMUST00000122068 925 ntBASIC11.87□□□□□ -0.51
SmoP56726 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Gm22144-201ENSMUST00000157402 102 ntBASIC11.87□□□□□ -0.51
SmoP56726 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SmoP56726 Mir8093-201ENSMUST00000185043 137 ntBASIC11.87□□□□□ -0.51
SmoP56726 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.87□□□□□ -0.51
SmoP56726 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.87□□□□□ -0.51
SmoP56726 Gm38314-201ENSMUST00000195709 625 ntBASIC11.87□□□□□ -0.51
SmoP56726 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SmoP56726 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.87□□□□□ -0.51
SmoP56726 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SmoP56726 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.87□□□□□ -0.51
SmoP56726 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.87□□□□□ -0.51
SmoP56726 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SmoP56726 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SmoP56726 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
SmoP56726 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
SmoP56726 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SmoP56726 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Gm22920-201ENSMUST00000102175 109 ntBASIC11.86□□□□□ -0.51
SmoP56726 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
SmoP56726 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.86□□□□□ -0.51
SmoP56726 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.86□□□□□ -0.51
SmoP56726 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.86□□□□□ -0.51
SmoP56726 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.86□□□□□ -0.51
SmoP56726 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.86□□□□□ -0.51
SmoP56726 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
SmoP56726 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SmoP56726 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms