Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Msh6P54276 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.91□□□□□ -0.02
Msh6P54276 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.91□□□□□ -0.02
Msh6P54276 Gm5621-201ENSMUST00000187303 640 ntBASIC14.91□□□□□ -0.02
Msh6P54276 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.91□□□□□ -0.02
Msh6P54276 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Msh6P54276 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.91□□□□□ -0.02
Msh6P54276 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.91□□□□□ -0.02
Msh6P54276 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.91□□□□□ -0.02
Msh6P54276 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Msh6P54276 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.91□□□□□ -0.02
Msh6P54276 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Msh6P54276 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Msh6P54276 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Msh6P54276 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Msh6P54276 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Msh6P54276 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Msh6P54276 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Msh6P54276 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.9□□□□□ -0.02
Msh6P54276 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.9□□□□□ -0.02
Msh6P54276 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Gm11354-201ENSMUST00000121974 422 ntBASIC14.9□□□□□ -0.02
Msh6P54276 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.9□□□□□ -0.02
Msh6P54276 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Msh6P54276 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Msh6P54276 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.9□□□□□ -0.02
Msh6P54276 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Gm3726-201ENSMUST00000203110 785 ntBASIC14.9□□□□□ -0.02
Msh6P54276 Gm18463-201ENSMUST00000207258 474 ntBASIC14.9□□□□□ -0.02
Msh6P54276 Gm18460-201ENSMUST00000208088 464 ntBASIC14.9□□□□□ -0.02
Msh6P54276 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.9□□□□□ -0.02
Msh6P54276 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.9□□□□□ -0.02
Msh6P54276 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Msh6P54276 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.9□□□□□ -0.02
Msh6P54276 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Msh6P54276 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh6P54276 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Msh6P54276 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Msh6P54276 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Msh6P54276 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.89□□□□□ -0.03
Msh6P54276 Gm14892-201ENSMUST00000117636 267 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Gm15615-201ENSMUST00000118876 198 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Gm10169-201ENSMUST00000121822 348 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Gm9089-201ENSMUST00000122027 526 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.89□□□□□ -0.03
Msh6P54276 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.89□□□□□ -0.03
Msh6P54276 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.89□□□□□ -0.03
Msh6P54276 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.89□□□□□ -0.03
Msh6P54276 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Msh6P54276 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh6P54276 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms