Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Shmt1P50431 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Shmt1P50431 Gm3508-201ENSMUST00000186012 792 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.49□□□□□ -0.41
Shmt1P50431 Gm45113-201ENSMUST00000207518 165 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.48□□□□□ -0.41
Shmt1P50431 Gm13263-201ENSMUST00000121271 838 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.48□□□□□ -0.41
Shmt1P50431 Gm10051-201ENSMUST00000145209 414 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.48□□□□□ -0.41
Shmt1P50431 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Gm45770-201ENSMUST00000212105 616 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Gm7940-201ENSMUST00000218195 769 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.48□□□□□ -0.41
Shmt1P50431 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shmt1P50431 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Shmt1P50431 Paupar-201ENSMUST00000194826 3482 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Shmt1P50431 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Shmt1P50431 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Gm13916-201ENSMUST00000117368 628 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Gm8731-201ENSMUST00000118088 412 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.47□□□□□ -0.41
Shmt1P50431 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Gm6905-201ENSMUST00000205729 511 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.47□□□□□ -0.41
Shmt1P50431 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shmt1P50431 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms