Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.06□□□□□ -0.48
SftpbP50405 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SftpbP50405 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.06□□□□□ -0.48
SftpbP50405 Gm8062-201ENSMUST00000139696 444 ntBASIC12.06□□□□□ -0.48
SftpbP50405 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Gm43433-201ENSMUST00000196573 481 ntBASIC12.06□□□□□ -0.48
SftpbP50405 Gm18893-201ENSMUST00000198416 943 ntBASIC12.06□□□□□ -0.48
SftpbP50405 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.06□□□□□ -0.48
SftpbP50405 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.06□□□□□ -0.48
SftpbP50405 Gm8712-201ENSMUST00000221090 701 ntBASIC12.06□□□□□ -0.48
SftpbP50405 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.06□□□□□ -0.48
SftpbP50405 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.06□□□□□ -0.48
SftpbP50405 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SftpbP50405 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SftpbP50405 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.05□□□□□ -0.48
SftpbP50405 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SftpbP50405 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
SftpbP50405 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SftpbP50405 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SftpbP50405 Gm11989-201ENSMUST00000117240 672 ntBASIC12.05□□□□□ -0.48
SftpbP50405 Gm11362-201ENSMUST00000118838 850 ntBASIC12.05□□□□□ -0.48
SftpbP50405 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.05□□□□□ -0.48
SftpbP50405 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
SftpbP50405 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.05□□□□□ -0.48
SftpbP50405 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Gm10312-201ENSMUST00000078515 489 ntBASIC12.05□□□□□ -0.48
SftpbP50405 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
SftpbP50405 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SftpbP50405 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SftpbP50405 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.04□□□□□ -0.48
SftpbP50405 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SftpbP50405 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Gm13297-201ENSMUST00000120205 934 ntBASIC12.04□□□□□ -0.48
SftpbP50405 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.04□□□□□ -0.48
SftpbP50405 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.04□□□□□ -0.48
SftpbP50405 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SftpbP50405 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.04□□□□□ -0.48
SftpbP50405 Gm38241-201ENSMUST00000192641 898 ntBASIC12.04□□□□□ -0.48
SftpbP50405 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Olfr284-202ENSMUST00000206647 966 ntBASIC12.04□□□□□ -0.48
SftpbP50405 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SftpbP50405 Gm30285-201ENSMUST00000214614 422 ntBASIC12.04□□□□□ -0.48
SftpbP50405 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.04□□□□□ -0.48
SftpbP50405 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpbP50405 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms