Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SftpdP50404 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Gm14028-201ENSMUST00000117434 479 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Gm12857-201ENSMUST00000117678 592 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Gm11960-201ENSMUST00000122068 925 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Gm24990-201ENSMUST00000157406 323 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Rps4l-202ENSMUST00000204242 789 ntBASIC12.43□□□□□ -0.42
SftpdP50404 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SftpdP50404 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SftpdP50404 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SftpdP50404 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.43□□□□□ -0.42
SftpdP50404 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.42□□□□□ -0.42
SftpdP50404 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SftpdP50404 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SftpdP50404 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SftpdP50404 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.42□□□□□ -0.42
SftpdP50404 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Gm15236-201ENSMUST00000117309 379 ntBASIC12.42□□□□□ -0.42
SftpdP50404 Gm12997-201ENSMUST00000120207 640 ntBASIC12.42□□□□□ -0.42
SftpdP50404 Gm12196-201ENSMUST00000120954 262 ntBASIC12.42□□□□□ -0.42
SftpdP50404 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SftpdP50404 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.42□□□□□ -0.42
SftpdP50404 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.42□□□□□ -0.42
SftpdP50404 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.42□□□□□ -0.42
SftpdP50404 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.42□□□□□ -0.42
SftpdP50404 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SftpdP50404 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SftpdP50404 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SftpdP50404 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpdP50404 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SftpdP50404 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpdP50404 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SftpdP50404 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SftpdP50404 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SftpdP50404 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.41□□□□□ -0.42
SftpdP50404 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms