Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.44□□□□□ -0.42
LmnaP48678 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.44□□□□□ -0.42
LmnaP48678 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LmnaP48678 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LmnaP48678 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
LmnaP48678 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LmnaP48678 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LmnaP48678 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
LmnaP48678 Gm23949-201ENSMUST00000104027 127 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Gm12015-201ENSMUST00000117065 843 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Gm15711-201ENSMUST00000118889 535 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Gm12380-201ENSMUST00000119012 544 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.43□□□□□ -0.42
LmnaP48678 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LmnaP48678 Gm25072-201ENSMUST00000175233 235 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 AY036118-201ENSMUST00000200021 923 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Gm8679-201ENSMUST00000210651 1036 ntBASIC12.43□□□□□ -0.42
LmnaP48678 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.43□□□□□ -0.42
LmnaP48678 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LmnaP48678 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.43□□□□□ -0.42
LmnaP48678 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.43□□□□□ -0.42
LmnaP48678 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LmnaP48678 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.42□□□□□ -0.42
LmnaP48678 Gm16296-201ENSMUST00000159905 325 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.42□□□□□ -0.42
LmnaP48678 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.42□□□□□ -0.42
LmnaP48678 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.42□□□□□ -0.42
LmnaP48678 Gm25026-201ENSMUST00000175017 188 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm8492-201ENSMUST00000182375 987 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm37905-201ENSMUST00000195310 341 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm43316-201ENSMUST00000197252 1295 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm44124-201ENSMUST00000204159 472 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.42□□□□□ -0.42
LmnaP48678 Gm45071-201ENSMUST00000205353 571 ntBASIC12.42□□□□□ -0.42
LmnaP48678 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LmnaP48678 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.42□□□□□ -0.42
LmnaP48678 CT009713.1-201ENSMUST00000224828 853 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms