Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
GdnfP48540 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.41□□□□□ -0.74
GdnfP48540 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.41□□□□□ -0.74
GdnfP48540 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.41□□□□□ -0.74
GdnfP48540 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Gm17420-201ENSMUST00000164753 153 ntBASIC10.41□□□□□ -0.74
GdnfP48540 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.41□□□□□ -0.74
GdnfP48540 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.41□□□□□ -0.74
GdnfP48540 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
GdnfP48540 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
GdnfP48540 Gm10478-201ENSMUST00000084451 396 ntBASIC10.41□□□□□ -0.74
GdnfP48540 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.41□□□□□ -0.74
GdnfP48540 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.41□□□□□ -0.74
GdnfP48540 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.41□□□□□ -0.74
GdnfP48540 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.41□□□□□ -0.74
GdnfP48540 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
GdnfP48540 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
GdnfP48540 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Gm13736-201ENSMUST00000119272 253 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Gm13875-201ENSMUST00000120162 282 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Gm13315-201ENSMUST00000120376 991 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Gm11793-201ENSMUST00000120433 981 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.4□□□□□ -0.74
GdnfP48540 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.4□□□□□ -0.74
GdnfP48540 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Rmrp-201ENSMUST00000157463 271 ntBASIC10.4□□□□□ -0.74
GdnfP48540 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Gm8018-201ENSMUST00000173536 789 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.4□□□□□ -0.74
GdnfP48540 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Gm44405-201ENSMUST00000198952 126 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
GdnfP48540 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.4□□□□□ -0.74
GdnfP48540 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.4□□□□□ -0.74
GdnfP48540 AC154828.2-201ENSMUST00000220908 1070 ntBASIC10.4□□□□□ -0.74
GdnfP48540 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Btrc-209ENSMUST00000224478 2194 ntBASIC10.4□□□□□ -0.74
GdnfP48540 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
GdnfP48540 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
GdnfP48540 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
GdnfP48540 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
GdnfP48540 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms