Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.68□□□□□ -0.7
Rfx3P48381 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm25214-201ENSMUST00000104573 129 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rfx3P48381 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm11222-201ENSMUST00000119005 738 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.68□□□□□ -0.7
Rfx3P48381 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.68□□□□□ -0.7
Rfx3P48381 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfx3P48381 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.68□□□□□ -0.7
Rfx3P48381 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Gm12036-201ENSMUST00000120008 530 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Rfx3P48381 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Gm27501-201ENSMUST00000183599 107 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Gm38266-201ENSMUST00000194931 421 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Rfx3P48381 Gm30285-201ENSMUST00000214614 422 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Gm9368-201ENSMUST00000219348 831 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Gm10312-201ENSMUST00000078515 489 ntBASIC10.67□□□□□ -0.7
Rfx3P48381 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfx3P48381 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Rfx3P48381 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms