Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.82□□□□□ -0.68
Nkx2-2P42586 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-2P42586 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Gm25881-201ENSMUST00000157783 103 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 Gm2965-201ENSMUST00000198365 343 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Gm7940-201ENSMUST00000218195 769 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 Gm18065-201ENSMUST00000221395 526 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Rubie-203ENSMUST00000227803 2430 ntBASIC10.81□□□□□ -0.68
Nkx2-2P42586 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-2P42586 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm11439-201ENSMUST00000118598 409 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm12266-201ENSMUST00000120311 962 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm17040-202ENSMUST00000170597 889 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm8815-201ENSMUST00000173809 620 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm27530-201ENSMUST00000184096 98 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm5714-201ENSMUST00000197343 566 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.8□□□□□ -0.68
Nkx2-2P42586 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms