Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.97□□□□□ -0.65
Cd40lgP27548 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.97□□□□□ -0.65
Cd40lgP27548 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.97□□□□□ -0.65
Cd40lgP27548 Gm18711-201ENSMUST00000199341 750 ntBASIC10.97□□□□□ -0.65
Cd40lgP27548 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Cd40lgP27548 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Gm8385-201ENSMUST00000058999 643 ntBASIC10.97□□□□□ -0.65
Cd40lgP27548 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.97□□□□□ -0.65
Cd40lgP27548 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.97□□□□□ -0.65
Cd40lgP27548 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm4034-201ENSMUST00000187674 480 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm17812-201ENSMUST00000204935 318 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm44262-201ENSMUST00000204969 372 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Gm45433-201ENSMUST00000209386 247 ntBASIC10.96□□□□□ -0.65
Cd40lgP27548 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cd40lgP27548 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Cd40lgP27548 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cd40lgP27548 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms