Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.37□□□□□ -0.59
BdnfP21237 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
BdnfP21237 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.37□□□□□ -0.59
BdnfP21237 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.37□□□□□ -0.59
BdnfP21237 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.37□□□□□ -0.59
BdnfP21237 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.37□□□□□ -0.59
BdnfP21237 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
BdnfP21237 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.37□□□□□ -0.59
BdnfP21237 Gm28882-201ENSMUST00000185504 314 ntBASIC11.37□□□□□ -0.59
BdnfP21237 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.37□□□□□ -0.59
BdnfP21237 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.37□□□□□ -0.59
BdnfP21237 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.37□□□□□ -0.59
BdnfP21237 Gm19309-201ENSMUST00000218295 205 ntBASIC11.37□□□□□ -0.59
BdnfP21237 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.37□□□□□ -0.59
BdnfP21237 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.37□□□□□ -0.59
BdnfP21237 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
BdnfP21237 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
BdnfP21237 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
BdnfP21237 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.37□□□□□ -0.59
BdnfP21237 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
BdnfP21237 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
BdnfP21237 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
BdnfP21237 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
BdnfP21237 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.36□□□□□ -0.59
BdnfP21237 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Rprl1-201ENSMUST00000158050 327 ntBASIC11.36□□□□□ -0.59
BdnfP21237 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Mospd4-201ENSMUST00000180618 576 ntBASIC11.36□□□□□ -0.59
BdnfP21237 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Gm37424-201ENSMUST00000191727 561 ntBASIC11.36□□□□□ -0.59
BdnfP21237 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.36□□□□□ -0.59
BdnfP21237 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.36□□□□□ -0.59
BdnfP21237 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.36□□□□□ -0.59
BdnfP21237 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms