Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
VimP20152 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.96□□□□□ -0.5
VimP20152 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VimP20152 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VimP20152 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.95□□□□□ -0.5
VimP20152 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.95□□□□□ -0.5
VimP20152 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VimP20152 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VimP20152 Gm2756-201ENSMUST00000195851 400 ntBASIC11.95□□□□□ -0.5
VimP20152 Gm2213-201ENSMUST00000197485 688 ntBASIC11.95□□□□□ -0.5
VimP20152 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.95□□□□□ -0.5
VimP20152 Gm32025-201ENSMUST00000217960 307 ntBASIC11.95□□□□□ -0.5
VimP20152 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.95□□□□□ -0.5
VimP20152 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.95□□□□□ -0.5
VimP20152 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.95□□□□□ -0.5
VimP20152 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.95□□□□□ -0.5
VimP20152 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VimP20152 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VimP20152 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
VimP20152 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.94□□□□□ -0.5
VimP20152 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
VimP20152 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.94□□□□□ -0.5
VimP20152 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VimP20152 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VimP20152 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
VimP20152 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.94□□□□□ -0.5
VimP20152 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.94□□□□□ -0.5
VimP20152 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.94□□□□□ -0.5
VimP20152 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.94□□□□□ -0.5
VimP20152 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.94□□□□□ -0.5
VimP20152 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.94□□□□□ -0.5
VimP20152 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VimP20152 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
VimP20152 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.94□□□□□ -0.5
VimP20152 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VimP20152 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
VimP20152 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
VimP20152 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VimP20152 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.94□□□□□ -0.5
VimP20152 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.94□□□□□ -0.5
VimP20152 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
VimP20152 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VimP20152 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms