Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TnfP06804 Gm11949-201ENSMUST00000117640 372 ntBASIC12.53□□□□□ -0.4
TnfP06804 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.53□□□□□ -0.4
TnfP06804 Gm5982-201ENSMUST00000196234 512 ntBASIC12.53□□□□□ -0.4
TnfP06804 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.53□□□□□ -0.4
TnfP06804 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.53□□□□□ -0.4
TnfP06804 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.52□□□□□ -0.4
TnfP06804 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TnfP06804 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TnfP06804 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Gm13888-201ENSMUST00000119148 422 ntBASIC12.52□□□□□ -0.41
TnfP06804 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TnfP06804 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.52□□□□□ -0.41
TnfP06804 Mir8115-201ENSMUST00000184992 119 ntBASIC12.52□□□□□ -0.41
TnfP06804 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.52□□□□□ -0.41
TnfP06804 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.52□□□□□ -0.41
TnfP06804 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.52□□□□□ -0.41
TnfP06804 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.52□□□□□ -0.41
TnfP06804 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.52□□□□□ -0.41
TnfP06804 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TnfP06804 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TnfP06804 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.52□□□□□ -0.41
TnfP06804 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.52□□□□□ -0.41
TnfP06804 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TnfP06804 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.51□□□□□ -0.41
TnfP06804 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.51□□□□□ -0.41
TnfP06804 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TnfP06804 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Gm11667-201ENSMUST00000119828 486 ntBASIC12.51□□□□□ -0.41
TnfP06804 Gm14460-201ENSMUST00000121511 639 ntBASIC12.51□□□□□ -0.41
TnfP06804 Gm7150-201ENSMUST00000122032 981 ntBASIC12.51□□□□□ -0.41
TnfP06804 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.51□□□□□ -0.41
TnfP06804 Gm8459-201ENSMUST00000162504 760 ntBASIC12.51□□□□□ -0.41
TnfP06804 Mir8093-201ENSMUST00000185043 137 ntBASIC12.51□□□□□ -0.41
TnfP06804 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.51□□□□□ -0.41
TnfP06804 Gm8285-201ENSMUST00000208293 759 ntBASIC12.51□□□□□ -0.41
TnfP06804 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
TnfP06804 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.51□□□□□ -0.41
TnfP06804 Gm2517-201ENSMUST00000215651 348 ntBASIC12.51□□□□□ -0.41
TnfP06804 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.51□□□□□ -0.41
TnfP06804 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.51□□□□□ -0.41
TnfP06804 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms