Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm14058-201ENSMUST00000116082 735 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm13045-201ENSMUST00000119019 712 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm11434-201ENSMUST00000122379 629 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm9630-201ENSMUST00000178304 885 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm5523-201ENSMUST00000180415 997 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Mir7677-201ENSMUST00000184226 67 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm19353-201ENSMUST00000184561 445 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Gm8959-201ENSMUST00000213150 571 ntBASIC9.94□□□□□ -0.82
Hoxa3P02831 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxa3P02831 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hoxa3P02831 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm23251-201ENSMUST00000103773 110 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm26286-201ENSMUST00000104166 134 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm14263-201ENSMUST00000117955 746 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm12196-201ENSMUST00000120954 262 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm25881-201ENSMUST00000157783 103 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm22334-201ENSMUST00000158070 133 ntBASIC9.93□□□□□ -0.82
Hoxa3P02831 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxa3P02831 Gm3332-201ENSMUST00000189337 928 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms