Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.15□□□□□ -0.14
Ube4aE9Q735 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gm11675-201ENSMUST00000121873 832 ntBASIC14.15□□□□□ -0.14
Ube4aE9Q735 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube4aE9Q735 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ube4aE9Q735 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm19091-201ENSMUST00000208120 978 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm5996-201ENSMUST00000211110 718 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm18065-201ENSMUST00000221395 526 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4aE9Q735 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.14□□□□□ -0.15
Ube4aE9Q735 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Gm14892-201ENSMUST00000117636 267 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 Gm15549-201ENSMUST00000121595 622 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Gm20495-201ENSMUST00000173902 235 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 Gm29410-201ENSMUST00000188383 694 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.13□□□□□ -0.15
Ube4aE9Q735 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms