Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm11531-201ENSMUST00000117614 555 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm9083-201ENSMUST00000120423 819 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm28043E0CXC2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm21769-201ENSMUST00000211922 111 ntBASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms