Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim30cD3YVI9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm12314-201ENSMUST00000118104 538 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm15547-201ENSMUST00000122152 333 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm17376-201ENSMUST00000166016 84 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm10076-201ENSMUST00000073238 384 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim30cD3YVI9 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim30cD3YVI9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim30cD3YVI9 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms