Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Gm13097-201ENSMUST00000210722 397 ntBASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Gm10254-201ENSMUST00000052888 867 ntBASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Gm5705-201ENSMUST00000066241 711 ntBASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm13296-201ENSMUST00000117854 997 ntBASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm5616-201ENSMUST00000165252 384 ntBASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm8741-201ENSMUST00000174736 384 ntBASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm43822-201ENSMUST00000200285 476 ntBASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubb1A2AQ07 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm11509-201ENSMUST00000117358 325 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm15276-201ENSMUST00000145953 498 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm20482-202ENSMUST00000174729 825 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm44364-201ENSMUST00000198368 141 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm7783-201ENSMUST00000204795 781 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm9899-201ENSMUST00000065519 555 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms