Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm11989-201ENSMUST00000117240 672 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm11362-201ENSMUST00000118838 850 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm8062-201ENSMUST00000139696 444 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm26956-201ENSMUST00000182176 986 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav18A0A075B656 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Olfr284-202ENSMUST00000206647 966 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav18A0A075B656 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Gm8712-201ENSMUST00000221090 701 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.68□□□□□ -0.86
Trav18A0A075B656 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav18A0A075B656 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm11700-201ENSMUST00000119409 403 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm38241-201ENSMUST00000192641 898 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm43433-201ENSMUST00000196573 481 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm18054-201ENSMUST00000207539 555 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm30285-201ENSMUST00000214614 422 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm10312-201ENSMUST00000078515 489 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.67□□□□□ -0.86
Trav18A0A075B656 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav18A0A075B656 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.66□□□□□ -0.86
Trav18A0A075B656 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav18A0A075B656 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms