Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm19353-201ENSMUST00000184561 445 ntBASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Ntng1-201ENSMUST00000051253 327 ntBASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cpsf3Q9QXK7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm12165-201ENSMUST00000117047 342 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm13809-201ENSMUST00000117921 597 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm11331-201ENSMUST00000119764 288 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm15595-201ENSMUST00000120840 961 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm20426-201ENSMUST00000173657 440 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm43378-201ENSMUST00000199336 582 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Gm1821-202ENSMUST00000227415 750 ntBASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf3Q9QXK7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.71□□□□□ -0.38
Cpsf3Q9QXK7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Cpsf3Q9QXK7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cpsf3Q9QXK7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf3Q9QXK7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf3Q9QXK7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf3Q9QXK7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm12579-201ENSMUST00000118040 783 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm18753-201ENSMUST00000201000 566 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm6905-201ENSMUST00000205729 511 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Nsd1-205ENSMUST00000224693 852 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf3Q9QXK7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms